Introduction to Genomics, Proteomics, and Bioinformatics

 

Time: Wednesday, 2:30 - 4:30 PM (January - May), Starting date: January 12, 2005

Place: ACS computer laboratory, MSB

Coordinator: Dr. Michael B. Mathews

Instructors: Dr. Scott Diehl, Dr. Hong Li, and Dr. Bin Tian

Topics:

Genomics:

Proteomics:

Bioinformatics:

Syllabus

Date

Instructor

Topic (Click to download lecture slides)

1

01/12/05

Dr. Diehl

Genome Sequencing: Laboratory Methods and Data Analysis

2

01/19/05

Dr. Diehl

Genetic Variation: SNPs and the Haplotype Map

3

01/26/05

Dr. Diehl

Human Disease Gene Mapping I: Family Studies 

4

02/02/05

Dr. Diehl

Human Disease Gene Mapping II: Association Studies

5

02/09/05

Dr. Diehl

Pharmacogenomics and Individualized Medicine

Exam I

6

02/16/05

Dr. Tian

Analysis of genomic sequences

7

02/23/05

Dr. Tian

Comparative genomics

8

03/02/05

Dr. Tian

Analysis of gene expression I: EST and SAGE

9

03/09/05

Dr. Tian

Analysis of gene expression II: DNA microarray

Exam II

Proteomics Homeworks

10

03/16/05

Dr. Li

Overview of Protein Structure and Function

11

03/23/05

Dr. Li

Analytical Technologies for Proteomics

12

03/30/05

Dr. Li

Mass Spectrometry and Protein Identification

13

04/06/05

Dr. Tian

Data analysis of proteomics data

14

04/13/05

Dr. Li

Proteomics Applications in Molecular Medicine

15

04/20/05

Dr. Li

Emerging Technologies in Proteomics

Exam III

 

Special seminars (suggested to participate):

03/03/05 (9am - 11:30am, MSB C600):

NCBI workshop

03/10/05 (12pm - 1pm, MSB E609):

 

Michael Zhang

Cold Spring Harbor Laboratory

"Combinatorial Regulation of Transcriptional Gene Networks"

 

Grading:

Attendance: 10%

Three exams: 90% (30% each)

 

 

Last updated on 3/15/05