Introduction to Genomics, Proteomics, and Bioinformatics (Fall, 2006)
Time: Tuesday, 6:00 - 7:30 PM
Place: MSB-E609b, UMDNJ-New Jersey Medical School
Course coordinator: Dr. Bin Tian
Syllabus:
|
Date |
Instructor |
Topic (Click to download lecture slides) |
|
|
Section I: Genomes |
1 |
8/29/06 |
Dr. Tian |
|
2 |
9/5/06 |
Dr. Donnelly |
|
|
3 |
9/12/06 |
Dr. Tian |
|
| 4 | 9/19/06 | Dr. Diehl | Using SNPs for disease gene discovery and pharmacogenomics |
|
Section II: Transcriptome |
|||
|
5 |
9/26/06 |
Dr. Tian |
|
|
6 |
10/3/06 |
Dr. Tian |
|
|
7 |
10/10/06 |
Dr. Soteropoulos |
|
|
8 |
10/17/06 |
Dr. Aris |
|
|
Section III: Proteome |
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|
9 |
10/24/06 |
Dr. Li |
|
|
10 |
10/31/06 |
Dr. Tian |
Hidden Markov Models: Prediction of protein domains and genes |
|
11 |
11/7/06 |
Dr. Li |
|
|
12 |
11/14/06 |
Dr. Li |
|
|
Section IV: Special topics |
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| 13 | 11/21/06 | Dr. Diehl | Advanced technologies for DNA sequencing and polymorphism detection |
| 14 | 11/28/06 | Dr. Yan | Mass spectrometry applications |
| 15 | 12/5/06 | Dr. Oh | Bayesian Statistics: Basics and Applications |
|
16 |
12/12/06 |
Dr. Tian |
|
Grading:
Attendance/participation: 10%;
Exams: 90% (4 take-home exams comprising 16 questions/small projects).
Instructors:
Dr. Virginie M. Aris(arisvm@umdnj.edu), Center for Applied Genomics, PHRI.
Dr. Scott Diehl (diehlsr@umdnj.edu), Center for Pharmacogenomics and Complex Disease Research, NJDS.
Dr. Bob Donnelly (donnelly@umdnj.edu), Molecular Resource Facility, NJMS.
Dr. Hong Li (liho2@umdnj.edu), Center for Advanced Proteomics Research, NJMS.
Dr. Cheongeun Oh (ohch@umdnj.edu), Department of Preventive Medicine & Community Health, NJMS.
Dr. Patricia Soteropoulos (soteropoulos@phri.org), Center for Applied Genomics, PHRI.
Dr. Bin Tian (btian@umdnj.edu), Department of Biochemistry and Molecular Biology, NJMS.
Dr. Lin Yan (yanl2@umdnj.edu), Department of Cell Biology & Molecular Medicine, NJMS.