=== Result of Multiple Alignment ===

Min: 11.44	Max: 15.44	Avg: 13.57
# STOCKHOLM 1.0

NM_000032:1-52                   TT-CG-TTCGTCCTCAGTGCAGGGCAACAGGA
NM_014585:151-250                CA-AC-TTCAGCTACAGTGTTAGCTAAGTTTG
NM_003234:3944-4043              AA-TT-ATCGGGAACAGTGTTTCCCATA-ATT
NM_003234:3844-3943              CA-TT-ATCGGGAGCAGTGTCTTCCATA-ATG
NM_003234:3444-3543              AA-TT-ATCGGAAGCAGTGCCTTCCATA-ATT
NM_003234:3394-3493              AT-TT-ATCAGTGACAGAGTTCACTATA-AAT
NM_000146:1-100                  GTCTCTTGCTTCAACAGTGTTTGGACGG-AAC
#=GC SS_cons                     ((.((.((.(((((......)))))))).)))
//

=== Guide Tree of Multiple Alignment ===

((((((NM_000032:1-52, NM_014585:151-250):14.550000000000004,
NM_003234:3944-4043):9.050000000000004,
NM_003234:3844-3943):12.033333333333335,
NM_003234:3444-3543):12.775000000000004,
NM_003234:3394-3493):10.019999999999998,
NM_000146:1-100):5.850000000000003

=== Weight Matrix for PatSearch ===

{(42,28,14,14),(57,0,0,42),(0,100,0,0),(14,14,0,71)
,(0,28,14,57),(0,0,0,100),(57,0,0,42),(0,0,14,85)
,(0,100,0,0),(28,0,57,14),(0,0,71,28),(14,42,28,14)
,(57,14,14,14),(57,0,28,14),(0,100,0,0),(100,0,0,0)
,(0,0,100,0),(14,0,0,85),(0,0,100,0),(0,28,0,71)
,(14,28,0,57),(14,14,14,57),(14,14,42,28),(0,71,28,0)
,(14,57,0,28),(85,14,0,0),(28,0,14,57),(57,14,28,0)
,(50,0,0,50),(71,0,14,14),(28,0,14,57),(14,14,28,42)
}